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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913258.1_cds_XP_016463313.1_56447
CDS Infomation

[gene=LOC107786361] [db_xref=GeneID:107786361] [protein=E3 ubiquitin-protein ligase RHF1A-like] [protein_id=XP_016463313.1] [location=join(44247..44366,45758..45804,45895..45957,46277..46367,46462..46769,46999..47094,47172..47532,49203..49214)] [gbkey=CDS]
Sequence

ATGGCCAACGATTCGTTTAACTCGCCGCCGATGATCGCGTCGCCAGCCGTCGTTGATGAT
AGCTTTGAGGATGCCTGTAGTATCTGCCTTGAGCCATTTAATTCCGATGATCCTCCTGAT
GTAACAGATTGTAAGCATGAATATCATTTGCAGTGTATTCTTGAATGGTCTCAGAGAAGC
AAGGAGTGCCCAATTTGTTGGAGGGTTCTTGCGCTAAAGGACCCTGCGAGCCAAGAGCTA
CTGGCTGCAGTGGAGATTGAAAGGAACATGAGGTCAAGGATTAATGTGCGTCATACCAAT
GAGGACGTTGAAGCCAACCATGATGCCCCTCAGCAGAATGATTCTGATTTTGAGGAGCGA
ATTATGCGACATTTTGCTGCTGCGACAAGTAGAGTCCGTCTTGTCAACAGAAGAAGAAGA
CAGGCGTCTTCAGGAATTGGTCCTACACAGGTTGTCCCTTCTGTGCCGGTAGGAGTTAGG
TCAAACCAGACACAGAATAATGAATCCACCGTACAGCCCCAAGGCTTTGAGTTTACTGGG
GATGGATCTGTTGCTTCTGCAACTTCATCTAGTATTGGGCCTGCATCATCATCAGTTCCT
GCCCATGGAAATGGTCCTTTTAAGCTTAGCCAACCACCGGCTTATGGCCCGCAGGGGTCA
AGCTCATCCGAGTTTCTTGCATTTTCTGAATCTATAAAATCGAAATGGTCTGCTGCTTCA
GCGAGGTATAAAGAATCAATCTCAAAAGGTACTCGTGGTTTTAAGGAAAAATTATTATCA
CGCAACACCTCTGTCAAGGAACTTGGCAAAGAAGTTCAGCGTGAGATGAGTGCTGGAATA
GCTGGCGTTACAAGAATGATTGAACGACTTGATCTTACTTCAAAACGTACTGGAGCTTCT
GAACCATTATCTGCATGTACCATGGGTACCTCAAATTTTCCTAGTAGAGGAGTGTGTGAG
CAAGGAAATGTGACATTTCAATCGCATGATGGTTGCAGAAAGAATTCTACAATTGAAGTA
ACTCCTACCACTCCTTCATTGATCTCCAACACCAACACTGGCCAAATGGAAATTTCTCTT
AGACAGAATGGAAACTGA

Peptide Sequence

PEP ID

XP_016463313.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Nicotiana tabacum]
Sequence

MANDSFNSPPMIASPAVVDDSFEDACSICLEPFNSDDPPDVTDCKHEYHLQCILEWSQRS
KECPICWRVLALKDPASQELLAAVEIERNMRSRINVRHTNEDVEANHDAPQQNDSDFEER
IMRHFAAATSRVRLVNRRRRQASSGIGPTQVVPSVPVGVRSNQTQNNESTVQPQGFEFTG
DGSVASATSSSIGPASSSVPAHGNGPFKLSQPPAYGPQGSSSSEFLAFSESIKSKWSAAS
ARYKESISKGTRGFKEKLLSRNTSVKELGKEVQREMSAGIAGVTRMIERLDLTSKRTGAS
EPLSACTMGTSNFPSRGVCEQGNVTFQSHDGCRKNSTIEVTPTTPSLISNTNTGQMEISL
RQNGN

Transcript Sequence

Gene sequence data has not been registered.